Plant GARDEN
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TOP > About the Species(Nicotiana tabacum var. TN90) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Nicotiana tabacum

CDS Sequence

CDS ID

lcl|NW_015912281.1_cds_XP_016462337.1_55576
CDS Infomation

[gene=LOC107785524] [db_xref=GeneID:107785524] [protein=pentatricopeptide repeat-containing protein At1g77170-like] [protein_id=XP_016462337.1] [location=complement(4549..5916)] [gbkey=CDS]
Sequence

ATGAGTCTATTTCATTGTTTCTTGCTCCGATTTGGTAGAAACAGAGTAGTAAACTCATTT
CAGCTTAGTCATAGTTTAGCCACCCTCGTTGATATTCCTGATTATGCCAAGACACTAGCG
ACCCGAATATCAAACTGCAATAATCTAGAGCAGCTCGACCAAATTTACGCCCACATAATC
CGAAATCACTTCTTGGAGTTGTATCCTGCAGAATTTCACTGGAACAACATTATCAGATCA
TATACTAGGCTTCAATCCCCCAGTAAGGCACTACATGTGTACATCACTATGTCTAGAGCT
GGTGTTCCTCCTGATACTTTCACCCTACCTATTGTTTTAAAAGCTATTGTTCTGAATTAT
GTTGTTATGGTACGGCAGCTTCATGGGGTTGCAGTAAAGCACGCTTTAGACACTAATATG
TATTGTGAGAGTGGCTTCATTAGTCTGTACTCAAAGGGTGGTGACTTTGAGAATGCTCGT
AAGGTGTTTGAACAAAATACTGAAAGAAAGTTGGGGTCTTGGAATGCTATTATAGCAGGG
TTGTCACAAGGTGGGCGTGCTAAAGAAGCGATAGAAATGTTCTTGGAGTTGAGAGAGAGT
GGGTTACAGCCTGATGATGTAACCATGGTTAGTGTGACATCAGCTTGTGGTGCTCTTGGA
GACTTGGATTTGGCTTTTCAATTGCATAAATGCGTCTTTCAAGCAAAAGCGTTGGAAAAG
TCTGATCTTTTGATGATGAATTCTCTCATTGATATGTACGGTAAATGTGGGAAGATGGAT
CTTGCTTATAGGGTGTTCTCAAGTATGAAAGAAAGAAATGTATCCTCGTGGACTTCTATG
ATTGTTGGTTATGCGATGCATGGGTATGTTAGAGATGCGCTTGAATGCTTCCGTTGCATG
AGGGAGGCAGGTGTTAGGCCTAACCATGTGACATTTATTGGGGTGTTGAGCGCTTGTGTA
CATGGTGGGATGGTGCAAGAAGGAAAGTATTATTTCAGCATGATGAAGAATGAATATGGT
ATTGCACCCATGTTGCAGCATTACGGGTGCATGGTGGATTTGCTTGGTAGGGCTGGGTTG
CTCGAGGAGGCAAGAGGGACGATTGAAGGTATGCCAATGAAAGCAAATGTTGTGATTTGG
GGGTGCCTAATGGGGGCTTGTGAGAAGCATGGGCATGTGAAAATGGGAGAATGGGTGGCT
AAGCACCTGCAACAGTTAGAACCGTGGAACGATGGAGTGTATGTGGTATTGTCCAACATT
TATGCCAGTAATGGCATGTGGGAAGAGGTAAGGAGAATGAGAGCAATTATGAAGGAGACA
AAACTTGCCAAGGTTCCTGCTTATAGCTTGTCCACAAGTTCAGATTGA

Peptide Sequence

PEP ID

XP_016462337.1
PEP Infomation

PREDICTED: pentatricopeptide repeat-containing protein At1g77170-like [Nicotiana tabacum]
Sequence

MSLFHCFLLRFGRNRVVNSFQLSHSLATLVDIPDYAKTLATRISNCNNLEQLDQIYAHII
RNHFLELYPAEFHWNNIIRSYTRLQSPSKALHVYITMSRAGVPPDTFTLPIVLKAIVLNY
VVMVRQLHGVAVKHALDTNMYCESGFISLYSKGGDFENARKVFEQNTERKLGSWNAIIAG
LSQGGRAKEAIEMFLELRESGLQPDDVTMVSVTSACGALGDLDLAFQLHKCVFQAKALEK
SDLLMMNSLIDMYGKCGKMDLAYRVFSSMKERNVSSWTSMIVGYAMHGYVRDALECFRCM
REAGVRPNHVTFIGVLSACVHGGMVQEGKYYFSMMKNEYGIAPMLQHYGCMVDLLGRAGL
LEEARGTIEGMPMKANVVIWGCLMGACEKHGHVKMGEWVAKHLQQLEPWNDGVYVVLSNI
YASNGMWEEVRRMRAIMKETKLAKVPAYSLSTSSD

Transcript Sequence

Gene sequence data has not been registered.